Psf.rar

Explicit values for each atom's mass and partial charge, used by the force field to calculate physical interactions. Connectivity Tables: Bonds: Explicit pairs of atoms that are chemically bonded. Angles: Triplets of atoms forming specific bond angles.

Quartets of atoms defining rotation around bonds. psf.rar

In a NAMD configuration file, point to the extracted file: structure input.psf . Explicit values for each atom's mass and partial

Use a utility like WinRAR or 7-Zip to extract the .psf file from the archive. psf.rar

Ensure you also have a corresponding coordinate file ( .pdb or .dcd ).

If your software requires a different topology format (like GROMACS .top ), use tools like vmd or parmed to convert the extracted PSF.